BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024F01LP1|AL428240
(1069 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1428 2026 0.0
3x_Contig1557 145 2e-34
3x_Contig1518 137 4e-32
3x_Contig1663 135 2e-31
3x_Contig1374 135 2e-31
3x_Contig1446 133 7e-31
3x_Contig1521 129 1e-29
>3x_Contig1428
Length = 9146
Score = 2026 bits (1020), Expect = 0.0
Identities = 1059/1070 (98%), Gaps = 3/1070 (0%)
Strand = Plus / Minus
Query: 1 gatcttcaacagatcatctagtacccgtagagtctgatatatatgatggatctagtgtca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7175 gatcttcaacagatcatctagtacccgtagagtctgatatatatgatggatctagtgtca 7116
Query: 61 cgtctattgtctgggagctgtcggacgacgccaagaataatgcacgcgggagattgatca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7115 cgtctattgtctgggagctgtcggacgacgccaagaataatgcacgcgggagattgatca 7056
Query: 121 gtataggaaaagttagtcaaggaattgtggaatataacggattgtttcagtgcattagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7055 gtataggaaaagttagtcaaggaattgtggaatataacggattgtttcagtgcattagaa 6996
Query: 181 cgtggaataactcagtggtataccaatacggttctcatgtggaagaaatttttgggcagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6995 cgtggaataactcagtggtataccaatacggttctcatgtggaagaaatttttgggcagt 6936
Query: 241 ttatgaagggattgagcactcacaattcccaatttccatggcaaagaacatatccttaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6935 ttatgaagggattgagcactcacaattcccaatttccatggcaaagaacatatccttaga 6876
Query: 301 ctacctgctttgacaacttcgcaagcgcaaaaaagattgtttccaaacaatcataaatta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6875 ctacctgctttgacaacttcgcaagcgcaaaaaagattgtttccaaacaatcataaatta 6816
Query: 361 attgccttgctctgtaccatggtagcgatttgaatttattgtcttttaactaatgaagtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6815 attgccttgctctgtaccatggtagcgatttgaatttattgtcttttaactaatgaagtg 6756
Query: 421 tatcaatatatgtwacgtcccccaaggtaaactatttaggaagatctttagtcagttgat 480
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6755 tatcaatatatgtaacgtcccccaaggtaaactatttaggaagatctttagtcagttgat 6696
Query: 481 aattacgattcacgctttcgattcacgctttagatctgagggacattttcctcaacagga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6695 aattacgattcacgctttcgattcacgctttagatctgagggacattttcctcaacagga 6636
Query: 541 aagggcataccccttacgaaaatacattgtcaaatacctatggaaccatatgagttattg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 6635 aagggcataccccttacgaaaatacattgtcaaatacctatggaaccatatgagtaattg 6576
Query: 601 aggttccctatcaaagctggattgccatatgtacaaattaaccatgacaccggaatgggc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6575 aggttccctatcaaagctggattgccatatgtacaaattaaccatgacaccggaatgggc 6516
Query: 661 ctgtgacagcattctccgaacttatacgagttatgtgacttgctcagtatatcaattatt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6515 ctgtgacagcattctccgaacttatacgagttatgtgacttgctcagtatatcaattatt 6456
Query: 721 atccgatatagtgtacgggctatcacatcacgctttcaccgtggagaccggggttcgact 780
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6455 atccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgact 6396
Query: 781 ccccgtatcggagtatctttttatttgaagcctatctacttagtagatgaacgaccgtgt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6395 ccccgtatcggagtatctttttatttgaagcctatctacttagtagatgaacgaccgtgt 6336
Query: 841 gataaacttgtttcgaccggaaagaccgtctcctcaaattcacaaagctccaacccctac 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6335 gataaacttgtttcgaccggaaagaccgtctcctcaaattcacaaagctccaacccctac 6276
Query: 901 ctgtgac-acagcataccaacgtaaaatgtttttttttttatttccttagtgctttaaag 959
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6275 ctgtgacaacagcataccaacgtaaaatgtttttttttttatttccttagtgctttaaag 6216
Query: 960 tccaattgactaacgattaatacacagttataawatttttggacgacatgactctattta 1019
||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||
Sbjct: 6215 tccaattgactaacgattaatacacagttataaaa-ttttggacgacatgact-tattta 6158
Query: 1020 acattgccggatctggttagctcacatgagttarttgtgtttttacgcca 1069
||||||||||||||||||||||||||||||| | | ||||||||||||||
Sbjct: 6157 acattgccggatctggttagctcacatgagtaagtggtgtttttacgcca 6108
>3x_Contig1557
Length = 10562
Score = 145 bits (73), Expect = 2e-34
Identities = 82/85 (96%)
Strand = Plus / Plus
Query: 718 attatccgatatagtgtacgggctatcacatcacgctttcaccgtggagaccggggttcg 777
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 2538 attatccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcg 2597
Query: 778 actccccgtatcggagtatcttttt 802
||||||||||||||||||| |||||
Sbjct: 2598 actccccgtatcggagtattttttt 2622
>3x_Contig1518
Length = 11021
Score = 137 bits (69), Expect = 4e-32
Identities = 75/77 (97%)
Strand = Plus / Minus
Query: 720 tatccgatatagtgtacgggctatcacatcacgctttcaccgtggagaccggggttcgac 779
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5819 tatccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgac 5760
Query: 780 tccccgtatcggagtat 796
|||||||||||||||||
Sbjct: 5759 tccccgtatcggagtat 5743
>3x_Contig1663
Length = 13533
Score = 135 bits (68), Expect = 2e-31
Identities = 74/76 (97%)
Strand = Plus / Plus
Query: 721 atccgatatagtgtacgggctatcacatcacgctttcaccgtggagaccggggttcgact 780
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856 atccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgact 915
Query: 781 ccccgtatcggagtat 796
||||||||||||||||
Sbjct: 916 ccccgtatcggagtat 931
>3x_Contig1374
Length = 8985
Score = 135 bits (68), Expect = 2e-31
Identities = 84/88 (95%), Gaps = 1/88 (1%)
Strand = Plus / Minus
Query: 720 tatccgatatagtgtacgggctatcacatcacgctttcaccgtggagaccggggttcgac 779
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8892 tatccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgac 8833
Query: 780 tccccgtatcggag-tatctttttattt 806
|||||||||||||| | |||||||||||
Sbjct: 8832 tccccgtatcggagttttctttttattt 8805
>3x_Contig1446
Length = 10598
Score = 133 bits (67), Expect = 7e-31
Identities = 73/75 (97%)
Strand = Plus / Minus
Query: 720 tatccgatatagtgtacgggctatcacatcacgctttcaccgtggagaccggggttcgac 779
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3306 tatccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgac 3247
Query: 780 tccccgtatcggagt 794
|||||||||||||||
Sbjct: 3246 tccccgtatcggagt 3232
>3x_Contig1521
Length = 8057
Score = 129 bits (65), Expect = 1e-29
Identities = 71/73 (97%)
Strand = Plus / Minus
Query: 722 tccgatatagtgtacgggctatcacatcacgctttcaccgtggagaccggggttcgactc 781
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4296 tccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgactc 4237
Query: 782 cccgtatcggagt 794
|||||||||||||
Sbjct: 4236 cccgtatcggagt 4224
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,637
Number of Sequences: 1807
Number of extensions: 11637
Number of successful extensions: 122
Number of sequences better than 1.0e-20: 7
length of query: 1069
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1053
effective length of database: 10,329,639
effective search space: 10877109867
effective search space used: 10877109867
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)